STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD10Ankyrin repeat domain-containing protein 10 isoform B. (361 aa)    
Predicted Functional Partners:
BVES
Blood vessel epicardial substance isoform A.
      
 0.559
SNX25
Sorting nexin-25.
    
 
 0.457
GPM6A
Neuronal membrane glycoprotein M6-a isoform A.
      
 0.457
PMS1
PMS1 protein-like protein 1.
    
 0.455
CEP19
Centrosomal protein of.
      
 0.434
IFT81
Intraflagellar transport 81-like protein isoform B.
    
 0.423
FCF1
rRNA-processing FCF1-like protein.
      
 0.422
CD84-1
SLAM family member 5 isoform A.
   
 0.404
Y1Q_0008386
SLAM family member 5-like.
   
 0.404
IFT88
Intraflagellar transport 88-like protein.
    
 0.401
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.