STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCNB2Potassium voltage-gated channel subfamily B member 2; Belongs to the potassium channel family. (674 aa)    
Predicted Functional Partners:
Y1Q_0002754
Potassium voltage-gated channel subfamily B member 1-like.
 
      0.900
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.874
GLRA4
Glycine receptor subunit alpha-4 isoform A; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
  
 0.675
RPL23A
60S ribosomal protein L23a.
   
 0.661
RPL35
60S ribosomal protein L35.
   
 0.659
RPL29
60S ribosomal protein L29.
   
 0.659
RPL31
60S ribosomal protein L31.
   
 0.658
RPL24
60S ribosomal protein L24.
   
 0.654
RPL30
60S ribosomal protein L30.
   
 0.652
RPL38
60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.633
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.