STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Y1Q_0016093Uncharacterized protein. (165 aa)    
Predicted Functional Partners:
GHRL-1
Appetite-regulating hormone isoform B.
     
 0.866
MLN
Promotilin.
   
  
 0.708
GHSR
Growth hormone secretagogue receptor type 1; Belongs to the G-protein coupled receptor 1 family.
    
 0.626
PPP1R35
Protein phosphatase 1 regulatory subunit 35 isoform A.
      
 0.613
BAHD1
Bromo adjacent-like proteiny domain-containing 1 protein.
      
 0.599
Y1Q_0015648
G_PROTEIN_RECEP_F1_2 domain-containing protein.
    
 0.489
GPR39
G-protein coupled receptor 39; Belongs to the G-protein coupled receptor 1 family.
    
 0.439
IRAK2
Interleukin-1 receptor-associated kinase-like 2.
    
 0.418
IRAK1
Interleukin-1 receptor-associated kinase 1.
    
 0.418
TATDN2
Putative deoxyribonuclease TATDN2.
      
 0.403
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.