STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LTKTyrosine-protein kinase receptor. (1425 aa)    
Predicted Functional Partners:
PTN
Pleiotrophin.
    
 0.756
GAB1
GRB2-associated-binding protein 1 isoform A.
    
 0.725
GRB2
Growth factor receptor-bound protein 2.
    
 0.710
CBLB-2
Uncharacterized protein.
   
 0.658
Y1Q_0010174
UBA domain-containing protein.
   
 0.658
CBLB
E3 ubiquitin-protein ligase CBL-B.
   
 0.658
TNS2
Tensin-2 isoform B.
    
 0.644
TNS1
Tensin-1 isoform B.
    
 0.644
Y1Q_0016956
Tensin-like.
    
 0.644
Y1Q_0017153
Uncharacterized protein.
    
 0.644
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.