STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL339S ribosomal protein L3, mitochondrial; Belongs to the universal ribosomal protein uL3 family. (350 aa)    
Predicted Functional Partners:
MRPS9
28S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.997
RPL23
60S ribosomal protein L23 isoform A; Belongs to the universal ribosomal protein uL14 family.
  
 0.997
MRPL2
39S ribosomal protein L2, mitochondrial isoform A.
  
 0.996
MRPL13
39S ribosomal protein L13, mitochondrial.
 
 0.996
MRPL21-1
39S ribosomal protein L21, mitochondrial isoform A.
   
 
 0.996
MRPS16
28S ribosomal protein S16, mitochondrial.
   
 
 0.995
MRPS6
28S ribosomal protein S6, mitochondrial.
   
 0.995
MRPS14
28S ribosomal protein S14, mitochondrial.
  
 
 0.995
MRPL20
39S ribosomal protein L20, mitochondrial.
   
 
 0.995
MRPL11
39S ribosomal protein L11, mitochondrial.
  
 0.995
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.