STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC35B1Solute carrier family 35 member B1. (683 aa)    
Predicted Functional Partners:
PWP2
Periodic tryptophan 2-like protein.
 
 
    0.625
SLC35D1
UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter.
   
  
 0.551
TMEM208
Transmembrane protein 208.
   
 
 0.546
GART-2
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
  
  
 0.482
GART
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
  
  
 0.482
DNAJB9
DnaJ-like protein subfamily B member 9.
   
  
 0.464
SLC35D3
Solute carrier family 35 member D3.
   
  
 0.419
SLC37A3
Sugar phosphate exchanger 3.
   
  
 0.413
SLC35C1
GDP-fucose transporter 1.
   
  
 0.402
SLC35F1
Solute carrier family 35 member F1.
      
 0.400
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.