STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Y1Q_0018372Uncharacterized protein. (345 aa)    
Predicted Functional Partners:
ARHGAP27
Rho GTPase-activating protein 27.
 
      0.898
ARHGAP15
Rho GTPase-activating protein 15.
 
 
  
 0.856
MYO9B
Unconventional myosin-IXb isoform B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.590
MYO9B-2
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.590
RHOV
Rho-related GTP-binding protein RhoV.
   
 0.477
PSTPIP1
Proline-serine-threonine phosphatase-interacting protein 1.
   
 
 0.438
ARHGAP1
Rho GTPase-activating protein 1.
     
 0.437
CDC42
Cell division control 42-like protein.
   
 0.434
PSTPIP2
Proline-serine-threonine phosphatase-interacting protein 2.
   
 
 0.429
RAC1
Ras-related C3 botulinum toxin substrate 1.
   
 0.413
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.