STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMPSTE24CAAX prenyl protease 1-like protein. (1233 aa)    
Predicted Functional Partners:
RCOR1
REST corepressor 1.
   
 0.995
HMG20B
High mobility group 20B.
   
 0.961
PHF21A
PHD finger protein 21A isoform D.
    
 0.952
RCOR2
REST corepressor 2.
   
 0.932
RCOR3
REST corepressor 3 isoform A.
   
 0.932
AR
Androgen receptor.
    
 0.889
REST
RE1-silencing transcription factor.
    
 0.869
GLYR1
Putative oxidoreductase GLYR1.
    
 
 0.852
HDAC2
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.820
RBBP4-2
WD_REPEATS_REGION domain-containing protein.
   
 0.820
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.