STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPUP00000001409annotation not available (583 aa)    
Predicted Functional Partners:
BANF1
Barrier to autointegration factor 1.
   
 0.890
ENSSPUP00000016106
annotation not available
    
 0.875
CASP6
Caspase 6.
    
 0.837
LEMD3
LEM domain containing 3.
    
 0.808
CASP3
Caspase 3.
    
 0.720
CASP7
Caspase 7.
    
 0.717
CASP2
Caspase 2.
    
 0.717
ENSSPUP00000019158
annotation not available
    
 0.717
ENSSPUP00000024587
annotation not available
    
 0.717
LMNA
Lamin A/C.
  
  
0.689
Your Current Organism:
Sphenodon punctatus
NCBI taxonomy Id: 8508
Other names: Hatteria punctata, S. punctatus, hatteria, tuatara
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.