T45_02168 protein (Streptomyces turgidiscabies)

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Score

T45_02168

Putative HTH-type transcriptional. (1048 aa)

Predicted Functional Partners:

rpoB_1

0.834

rpoC

0.829

rpoA_1

0.794

rpoA_2

0.794

rpoZ

0.778

carD

0.769

rbpA_2

0.769

rpoB_2

0.765

hrdA

0.759

sigA

0.759

Your Current Organism:

Streptomyces turgidiscabies

NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T45_02168	carD	T45_02168	T45_06076	Putative HTH-type transcriptional.	RNA polymerase-binding transcription factor.	0.769
T45_02168	hrdA	T45_02168	T45_00394	Putative HTH-type transcriptional.	RNA polymerase principal sigma factor HrdA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.759
T45_02168	rbpA_2	T45_02168	T45_08155	Putative HTH-type transcriptional.	RNA polymerase-binding protein RbpA; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.	0.769
T45_02168	rpoA_1	T45_02168	T45_04383	Putative HTH-type transcriptional.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.794
T45_02168	rpoA_2	T45_02168	T45_08564	Putative HTH-type transcriptional.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.794
T45_02168	rpoB_1	T45_02168	T45_07178	Putative HTH-type transcriptional.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.834
T45_02168	rpoB_2	T45_02168	T45_07639	Putative HTH-type transcriptional.	DNA-directed RNA polymerase subunit beta.	0.765
T45_02168	rpoC	T45_02168	T45_07177	Putative HTH-type transcriptional.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.829
T45_02168	rpoZ	T45_02168	T45_08441	Putative HTH-type transcriptional.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.778
T45_02168	sigA	T45_02168	T45_02381	Putative HTH-type transcriptional.	RNA polymerase sigma factor SigA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.759
carD	T45_02168	T45_06076	T45_02168	RNA polymerase-binding transcription factor.	Putative HTH-type transcriptional.	0.769
carD	hrdA	T45_06076	T45_00394	RNA polymerase-binding transcription factor.	RNA polymerase principal sigma factor HrdA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.854
carD	rbpA_2	T45_06076	T45_08155	RNA polymerase-binding transcription factor.	RNA polymerase-binding protein RbpA; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.	0.969
carD	rpoA_1	T45_06076	T45_04383	RNA polymerase-binding transcription factor.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.902
carD	rpoA_2	T45_06076	T45_08564	RNA polymerase-binding transcription factor.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.901
carD	rpoB_1	T45_06076	T45_07178	RNA polymerase-binding transcription factor.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.948
carD	rpoB_2	T45_06076	T45_07639	RNA polymerase-binding transcription factor.	DNA-directed RNA polymerase subunit beta.	0.776
carD	rpoC	T45_06076	T45_07177	RNA polymerase-binding transcription factor.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.963
carD	rpoZ	T45_06076	T45_08441	RNA polymerase-binding transcription factor.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.961
carD	sigA	T45_06076	T45_02381	RNA polymerase-binding transcription factor.	RNA polymerase sigma factor SigA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.854