Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MICA_1242 | MICA_1243 | MICA_1242 | MICA_1243 | Hypothetical protein; Belongs to the PEPCase type 1 family. | Putative membrane protein. | 0.533 |
MICA_1242 | MICA_817 | MICA_1242 | MICA_817 | Hypothetical protein; Belongs to the PEPCase type 1 family. | maeB. | 0.614 |
MICA_1242 | MICA_821 | MICA_1242 | MICA_821 | Hypothetical protein; Belongs to the PEPCase type 1 family. | N-formylglutamate amidohydrolase family protein. | 0.800 |
MICA_1242 | MICA_822 | MICA_1242 | MICA_822 | Hypothetical protein; Belongs to the PEPCase type 1 family. | N-formylglutamate amidohydrolase. | 0.800 |
MICA_1242 | eno | MICA_1242 | MICA_1308 | Hypothetical protein; Belongs to the PEPCase type 1 family. | Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.933 |
MICA_1242 | gltA | MICA_1242 | MICA_1324 | Hypothetical protein; Belongs to the PEPCase type 1 family. | Citrate (Si)-synthase; Belongs to the citrate synthase family. | 0.828 |
MICA_1242 | mdh | MICA_1242 | MICA_643 | Hypothetical protein; Belongs to the PEPCase type 1 family. | Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.930 |
MICA_1242 | ppdK | MICA_1242 | MICA_777 | Hypothetical protein; Belongs to the PEPCase type 1 family. | Pyruvate, phosphate dikinase; Belongs to the PEP-utilizing enzyme family. | 0.930 |
MICA_1242 | pyk | MICA_1242 | MICA_2361 | Hypothetical protein; Belongs to the PEPCase type 1 family. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.930 |
MICA_1242 | tpiA | MICA_1242 | MICA_1315 | Hypothetical protein; Belongs to the PEPCase type 1 family. | Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.584 |
MICA_1243 | MICA_1242 | MICA_1243 | MICA_1242 | Putative membrane protein. | Hypothetical protein; Belongs to the PEPCase type 1 family. | 0.533 |
MICA_817 | MICA_1242 | MICA_817 | MICA_1242 | maeB. | Hypothetical protein; Belongs to the PEPCase type 1 family. | 0.614 |
MICA_817 | MICA_821 | MICA_817 | MICA_821 | maeB. | N-formylglutamate amidohydrolase family protein. | 0.800 |
MICA_817 | MICA_822 | MICA_817 | MICA_822 | maeB. | N-formylglutamate amidohydrolase. | 0.800 |
MICA_817 | eno | MICA_817 | MICA_1308 | maeB. | Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.771 |
MICA_817 | gltA | MICA_817 | MICA_1324 | maeB. | Citrate (Si)-synthase; Belongs to the citrate synthase family. | 0.952 |
MICA_817 | mdh | MICA_817 | MICA_643 | maeB. | Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.981 |
MICA_817 | ppdK | MICA_817 | MICA_777 | maeB. | Pyruvate, phosphate dikinase; Belongs to the PEP-utilizing enzyme family. | 0.961 |
MICA_817 | pyk | MICA_817 | MICA_2361 | maeB. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.981 |
MICA_817 | tpiA | MICA_817 | MICA_1315 | maeB. | Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.655 |
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