Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
V4SJG1_9ROSI | V4W1Z8_9ROSI | V4SJG1 | V4W1Z8 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | HTH myb-type domain-containing protein. | 0.436 |
V4TRH0_9ROSI | V4UV14_9ROSI | V4TRH0 | V4UV14 | CCT domain-containing protein. | CCT domain-containing protein. | 0.429 |
V4TRH0_9ROSI | V4W1Z8_9ROSI | V4TRH0 | V4W1Z8 | CCT domain-containing protein. | HTH myb-type domain-containing protein. | 0.408 |
V4U756_9ROSI | V4W1Z8_9ROSI | V4U756 | V4W1Z8 | Uncharacterized protein. | HTH myb-type domain-containing protein. | 0.474 |
V4UV14_9ROSI | V4TRH0_9ROSI | V4UV14 | V4TRH0 | CCT domain-containing protein. | CCT domain-containing protein. | 0.429 |
V4UV14_9ROSI | V4W1Z8_9ROSI | V4UV14 | V4W1Z8 | CCT domain-containing protein. | HTH myb-type domain-containing protein. | 0.445 |
V4W1Z8_9ROSI | V4SJG1_9ROSI | V4W1Z8 | V4SJG1 | HTH myb-type domain-containing protein. | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | 0.436 |
V4W1Z8_9ROSI | V4TRH0_9ROSI | V4W1Z8 | V4TRH0 | HTH myb-type domain-containing protein. | CCT domain-containing protein. | 0.408 |
V4W1Z8_9ROSI | V4U756_9ROSI | V4W1Z8 | V4U756 | HTH myb-type domain-containing protein. | Uncharacterized protein. | 0.474 |
V4W1Z8_9ROSI | V4UV14_9ROSI | V4W1Z8 | V4UV14 | HTH myb-type domain-containing protein. | CCT domain-containing protein. | 0.445 |