Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
V4RLW3_9ROSI | V4SC52_9ROSI | V4RLW3 | V4SC52 | Cleavage and polyadenylation specificity factor subunit 2. | Uncharacterized protein. | 0.993 |
V4RLW3_9ROSI | V4SV61_9ROSI | V4RLW3 | V4SV61 | Cleavage and polyadenylation specificity factor subunit 2. | Uncharacterized protein. | 0.621 |
V4RLW3_9ROSI | V4SV92_9ROSI | V4RLW3 | V4SV92 | Cleavage and polyadenylation specificity factor subunit 2. | TPR_REGION domain-containing protein. | 0.964 |
V4RLW3_9ROSI | V4T8K1_9ROSI | V4RLW3 | V4T8K1 | Cleavage and polyadenylation specificity factor subunit 2. | RRM domain-containing protein. | 0.989 |
V4RLW3_9ROSI | V4TQM9_9ROSI | V4RLW3 | V4TQM9 | Cleavage and polyadenylation specificity factor subunit 2. | WD_REPEATS_REGION domain-containing protein. | 0.995 |
V4RLW3_9ROSI | V4U418_9ROSI | V4RLW3 | V4U418 | Cleavage and polyadenylation specificity factor subunit 2. | WD_REPEATS_REGION domain-containing protein. | 0.997 |
V4RLW3_9ROSI | V4U7E9_9ROSI | V4RLW3 | V4U7E9 | Cleavage and polyadenylation specificity factor subunit 2. | Pre-mRNA cleavage factor Im 25 kDa subunit; Component of the cleavage factor Im (CFIm) complex that plays a key role in pre-mRNA 3'-processing. | 0.927 |
V4RLW3_9ROSI | V4UFB3_9ROSI | V4RLW3 | V4UFB3 | Cleavage and polyadenylation specificity factor subunit 2. | Uncharacterized protein. | 0.972 |
V4RLW3_9ROSI | V4UL48_9ROSI | V4RLW3 | V4UL48 | Cleavage and polyadenylation specificity factor subunit 2. | Fip1 domain-containing protein. | 0.993 |
V4RLW3_9ROSI | V4UQR9_9ROSI | V4RLW3 | V4UQR9 | Cleavage and polyadenylation specificity factor subunit 2. | Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation; Belongs to the Clp1 family. Clp1 subfamily. | 0.935 |
V4SC52_9ROSI | V4RLW3_9ROSI | V4SC52 | V4RLW3 | Uncharacterized protein. | Cleavage and polyadenylation specificity factor subunit 2. | 0.993 |
V4SC52_9ROSI | V4SV61_9ROSI | V4SC52 | V4SV61 | Uncharacterized protein. | Uncharacterized protein. | 0.557 |
V4SC52_9ROSI | V4SV92_9ROSI | V4SC52 | V4SV92 | Uncharacterized protein. | TPR_REGION domain-containing protein. | 0.586 |
V4SC52_9ROSI | V4T8K1_9ROSI | V4SC52 | V4T8K1 | Uncharacterized protein. | RRM domain-containing protein. | 0.958 |
V4SC52_9ROSI | V4TQM9_9ROSI | V4SC52 | V4TQM9 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.559 |
V4SC52_9ROSI | V4U418_9ROSI | V4SC52 | V4U418 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.995 |
V4SC52_9ROSI | V4UFB3_9ROSI | V4SC52 | V4UFB3 | Uncharacterized protein. | Uncharacterized protein. | 0.965 |
V4SC52_9ROSI | V4UL48_9ROSI | V4SC52 | V4UL48 | Uncharacterized protein. | Fip1 domain-containing protein. | 0.970 |
V4SC52_9ROSI | V4UQR9_9ROSI | V4SC52 | V4UQR9 | Uncharacterized protein. | Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation; Belongs to the Clp1 family. Clp1 subfamily. | 0.580 |
V4SV61_9ROSI | V4RLW3_9ROSI | V4SV61 | V4RLW3 | Uncharacterized protein. | Cleavage and polyadenylation specificity factor subunit 2. | 0.621 |
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