STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4UFB3_9ROSIUncharacterized protein. (879 aa)    
Predicted Functional Partners:
V4RLW3_9ROSI
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.972
V4U418_9ROSI
WD_REPEATS_REGION domain-containing protein.
   
 0.972
V4UL48_9ROSI
Fip1 domain-containing protein.
    
 0.972
V4SV92_9ROSI
TPR_REGION domain-containing protein.
   
 0.970
V4TQM9_9ROSI
WD_REPEATS_REGION domain-containing protein.
   
 0.969
V4U7E9_9ROSI
Pre-mRNA cleavage factor Im 25 kDa subunit; Component of the cleavage factor Im (CFIm) complex that plays a key role in pre-mRNA 3'-processing.
    
 0.966
V4SC52_9ROSI
Uncharacterized protein.
   
 0.965
V4T8K1_9ROSI
RRM domain-containing protein.
   
 0.964
V4UQR9_9ROSI
Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation; Belongs to the Clp1 family. Clp1 subfamily.
    
 0.946
V4SV61_9ROSI
Uncharacterized protein.
    
 0.906
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
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