STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF99396.1KEGG: neu:NE0726 hypothetical protein; TIGRFAM: variant PEP-CTERM exosortase signal; PFAM: PEP-CTERM bacterial. (242 aa)    
Predicted Functional Partners:
AEF99395.1
Hemin-degrading family protein; PFAM: Haemin-degrading; KEGG: mxa:MXAN_1318 hemin transport protein HemS.
       0.580
AEF99394.1
PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: vex:VEA_001358 pyridoxamine 5'-phosphate oxidase-related putative heme iron utilization protein.
       0.479
AEF99397.1
KEGG: mep:MPQ_1703 hypothetical protein.
       0.479
hmuV
Iron-chelate-transporting ATPase; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
       0.446
AEF99393.1
ABC-type transporter, periplasmic subunit; PFAM: Periplasmic binding protein; KEGG: pla:Plav_0182 periplasmic binding protein.
       0.446
AEF99392.1
ABC-type transporter, integral membrane subunit; PFAM: Bacterial transport system permease protein; KEGG: tra:Trad_1157 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.424
AEF99398.1
KEGG: smt:Smal_0645 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; TIGRFAM: TonB-dependent haemoglobin/transferrin/lactoferrin receptor; TonB-dependent haem/haemoglobin receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug.
       0.412
AEF99399.1
Hypothetical protein.
       0.412
Your Current Organism:
Methylomonas methanica
NCBI taxonomy Id: 857087
Other names: M. methanica MC09, Methylomonas methanica MC09, Methylomonas methanica str. MC09, Methylomonas methanica strain MC09
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.