STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG00423.1TIGRFAM: integrating conjugative element protein, PFL_4695 family; KEGG: net:Neut_0099 hypothetical protein. (163 aa)    
Predicted Functional Partners:
AEG00424.1
TIGRFAM: conjugative coupling factor TraD, SXT/TOL subfamily; KEGG: noc:Noc_0632 hypothetical protein.
 
     0.953
AEG00409.1
KEGG: noc:Noc_0628 PilL protein.
 
     0.804
AEG00411.1
TIGRFAM: integrating conjugative element protein, PFL_4693 family; KEGG: hso:HS_1747 hypothetical protein.
 
     0.804
AEG00434.1
TIGRFAM: integrating conjugative element protein, PFL_4703 family; KEGG: noc:Noc_0644 hypothetical protein.
 
     0.804
AEG00435.1
TIGRFAM: integrating conjugative element protein, PFL_4704 family; KEGG: noc:Noc_0645 hypothetical protein.
 
     0.804
AEG00436.1
TIGRFAM: integrating conjugative element protein, PFL_4705 family; KEGG: noc:Noc_0646 hypothetical protein.
 
     0.804
AEG00437.1
TIGRFAM: conjugative transfer region lipoprotein, TIGR03751 family; KEGG: noc:Noc_0647 hypothetical protein.
 
     0.804
AEG00438.1
TIGRFAM: conjugative transfer ATPase, PFL_4706 family; KEGG: noc:Noc_0648 hypothetical protein.
 
     0.804
AEG00442.1
TIGRFAM: integrating conjugative element protein, PFL_4711 family; KEGG: noc:Noc_0652 hypothetical protein.
 
     0.804
AEG00444.1
KEGG: noc:Noc_0653 hypothetical protein.
 
     0.804
Your Current Organism:
Methylomonas methanica
NCBI taxonomy Id: 857087
Other names: M. methanica MC09, Methylomonas methanica MC09, Methylomonas methanica str. MC09, Methylomonas methanica strain MC09
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