STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG01814.1TIGRFAM: Type VI secretion system, FHA domain-containing; PFAM: Forkhead-associated; KEGG: pap:PSPA7_0152 hypothetical protein; SMART: Forkhead-associated. (497 aa)    
Predicted Functional Partners:
AEG01812.1
KEGG: pap:PSPA7_0149 hypothetical protein; TIGRFAM: Type IV / VI secretion system, DotU; Type VI secretion system, OmpA/MotB; PFAM: Type IV / VI secretion system, DotU; Outer membrane protein, OmpA/MotB, C-terminal.
 
  
 0.966
AEG01810.1
Protein serine/threonine phosphatase; TIGRFAM: Type VI secretion system-associated, BMAA0400; PFAM: Type VI secretion system-associated, BMAA0400; Protein phosphatase 2C, N-terminal; KEGG: cja:CJA_1952 serine/threonine protein phosphatase; SMART: Protein phosphatase 2C-related.
 
  
 0.960
AEG01813.1
Type VI secretion protein, VC_A0114 family; KEGG: azl:AZL_017770 hypothetical protein; TIGRFAM: Protein of unknown function DUF876, bacterial; PFAM: Protein of unknown function DUF876, bacterial.
 
  
 0.951
AEG01811.1
KEGG: azo:azo3890 ImcF-like protein; TIGRFAM: Type VI secretion system, IcmF; PFAM: ImcF-related; Protein of unknown function DUF1215.
 
  
 0.947
AEG01817.1
TIGRFAM: Type VI secretion system, lipoprotein VCA0113; KEGG: vap:Vapar_0552 type VI secretion lipoprotein, VC_A0113 family.
 
  
 0.923
AEF99158.1
PFAM: Protein of unknown function DUF877; KEGG: nde:NIDE2011 hypothetical protein.
 
  
 0.917
AEF99288.1
KEGG: pmy:Pmen_2321 ImpA domain-containing protein; TIGRFAM: Type VI secretion system-associated, ImpA; PFAM: ImpA, N-terminal.
 
  
 0.861
AEF99293.1
KEGG: xac:XAC4143 hypothetical protein; TIGRFAM: Type VI secretion system, lysozyme-related; PFAM: GPW/gp25.
 
  
 0.856
AEF99294.1
KEGG: psl:Psta_1836 type VI secretion protein, VC_A0110 family; TIGRFAM: Type VI secretion system, VCA0110; PFAM: Type VI secretion system, VCA0110.
 
  
 0.848
AEF99290.1
KEGG: psl:Psta_1832 type VI secretion protein, EvpB/VC_A0108 family; TIGRFAM: Protein of unknown function DUF877; PFAM: Protein of unknown function DUF877.
 
  
 0.844
Your Current Organism:
Methylomonas methanica
NCBI taxonomy Id: 857087
Other names: M. methanica MC09, Methylomonas methanica MC09, Methylomonas methanica str. MC09, Methylomonas methanica strain MC09
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.