STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJD64519.1Hypothetical protein. (249 aa)    
Predicted Functional Partners:
EJD64520.1
Hypothetical protein.
 
 0.991
EJD65074.1
Hypothetical protein.
 
  0.967
EJD64849.1
Hypothetical protein.
  0.867
EJD64850.1
Hypothetical protein.
 
  0.798
EJD65322.1
Hypothetical protein.
 
    0.744
EJD64573.1
Hypothetical protein.
    
0.576
EJD64518.1
Undecaprenyl pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
    0.573
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
       0.484
EJD64521.1
Hypothetical protein.
       0.449
EJD64807.1
Hypothetical protein.
    
0.443
Your Current Organism:
Scardovia wiggsiae
NCBI taxonomy Id: 857290
Other names: S. wiggsiae F0424, Scardovia wiggsiae F0424, Scardovia wiggsiae str. F0424, Scardovia wiggsiae strain F0424
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