STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glmS-2Methylaspartate mutase S chain; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate). (137 aa)    
Predicted Functional Partners:
glmE
Methylaspartate mutase, E subunit; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate).
 
  0.999
CAAU_1813
Methylaspartate ammonia-lyase.
 
  
  0.996
CAAU_0562
Pyruvate-flavodoxin oxidoreductase.
    
 0.969
CAAU_1811
METHYLASPARTATE MUTASE.
 
     0.955
glsA
Glutaminase; Belongs to the glutaminase family.
    
  0.879
CAAU_1809
Regulatory protein GntR, HTH.
 
     0.866
CAAU_0091
Iron-sulfur protein.
    
  0.848
CAAU_2571
Probable reactivating factor for D-ornithine aminomutase.
 
     0.681
CAAU_0628
NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
 0.657
CAAU_1236
NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
 0.657
Your Current Organism:
Caloramator australicus
NCBI taxonomy Id: 857293
Other names: C. australicus RC3, Caloramator australicus KCTC 5601, Caloramator australicus RC3, Caloramator australicus str. RC3, Caloramator australicus strain RC3, Caloramator sp. KCTC 5601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.