STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uxaCHAMAP: Uronate isomerase; KEGG: ttm:Tthe_2404 glucuronate isomerase; PFAM: Uronate isomerase. (466 aa)    
Predicted Functional Partners:
AEF18053.1
KEGG: ttm:Tthe_2387 mannitol dehydrogenase domain; PFAM: Mannitol dehydrogenase, C-terminal; Mannitol dehydrogenase, N-terminal.
 
 
 0.980
uxaB
HAMAP: Altronate oxidoreductase; KEGG: ttm:Tthe_2396 mannitol dehydrogenase domain; PFAM: Mannitol dehydrogenase, C-terminal; Mannitol dehydrogenase, N-terminal.
 
 
 0.977
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
  
 0.973
AEF18057.1
KEGG: ttm:Tthe_2391 hypothetical protein.
 
  
 0.931
AEF18087.1
KEGG: gym:GYMC10_4842 xylan 1,4-beta-xylosidase; PFAM: Glycoside hydrolase, family 43; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.844
AEF16317.1
KEGG: ttm:Tthe_0363 parallel beta-helix repeat.
  
  
  0.832
AEF16600.1
KEGG: ttm:Tthe_0656 alpha-L-arabinofuranosidase domain protein; PFAM: Alpha-L-arabinofuranosidase, C-terminal; SMART: Alpha-L-arabinofuranosidase, C-terminal.
     
 0.823
AEF16607.1
L-ribulose-5-phosphate 4-epimerase; KEGG: ttm:Tthe_0668 class II aldolase/adducin family protein; PFAM: Class II aldolase/adducin, N-terminal.
     
 0.823
AEF18141.1
KEGG: bpb:bpr_I2814 L-ribulose-5-phosphate 4-epimerase AraD; PFAM: Class II aldolase/adducin, N-terminal.
     
 0.823
AEF17764.1
KEGG: ttm:Tthe_0983 xylan 1,4-beta-xylosidase; PFAM: Glycoside hydrolase, family 39.
     
  0.800
Your Current Organism:
Thermoanaerobacterium xylanolyticum
NCBI taxonomy Id: 858215
Other names: T. xylanolyticum LX-11, Thermoanaerobacterium xylanolyticum DSM 7097, Thermoanaerobacterium xylanolyticum LX-11, Thermoanaerobacterium xylanolyticum str. LX-11, Thermoanaerobacterium xylanolyticum strain LX-11
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.