STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVAR_0087Putative secreted protein; Bacterial lipocalin. (236 aa)    
Predicted Functional Partners:
CVAR_3062
Putative secreted protein.
  
 
   0.640
CVAR_3008
Predicted integral membrane protein.
  
     0.611
CVAR_0396
Putative secreted protein.
  
     0.566
cmtD
Trehalose corynomycolyl transferase; Predicted esterase.
  
     0.518
mmpL1
Predicted drug exporters of the RND superfamily.
       0.511
CVAR_1461
Hypothetical protein; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
  
   
 0.486
CVAR_0006
Hypothetical protein; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
     0.480
cmtG
Trehalose corynomycolyl transferase; Predicted esterase.
  
     0.453
CVAR_2744
Putative membrane protein; Type V secretory pathway, adhesin AidA.
  
     0.441
CVAR_2770
Putative secreted protein; Predicted esterase.
  
     0.432
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.