STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVAR_0224Hypothetical protein. (186 aa)    
Predicted Functional Partners:
fpr
NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
    
 0.726
gltD
NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
    
 0.726
CVAR_1813
Hypothetical protein; Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
  
 0.687
nifU
NifU homolog involved in Fe-S cluster formation.
  
 0.678
narB
Nitrate reductase; Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 
 0.617
CVAR_0426
Protein tyrosine/serine phosphatase.
    
   0.601
cysJ
Sulfite reductase, alpha subunit (flavoprotein).
   
 
 0.596
trxB
Thioredoxin reductase.
   
 
 0.595
cysI
Sulfite reductase, beta subunit (hemoprotein); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
   
 
 0.584
fadH
NADH:flavin oxidoreductases, Old Yellow Enzyme family.
  
 
 0.511
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.