STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fprNADPH-dependent glutamate synthase beta chain and related oxidoreductases. (475 aa)    
Predicted Functional Partners:
gltB2
Glutamate synthase domain 2.
 
 
 0.999
gltB
Glutamate synthase domain 2.
 
 
 0.999
cysI
Sulfite reductase, beta subunit (hemoprotein); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
  
 0.899
cysH
Adenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
  
  
 0.848
fdxA
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
 
 
 0.784
metY
O-acetylhomoserine sulfhydrylase.
  
  
 0.777
CVAR_1018
Ferredoxin; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
   
 0.744
CVAR_1022
Ferredoxin; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
   
 0.744
CVAR_2045
Hypothetical protein; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
   
 0.744
CVAR_2647
Ferredoxin; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
   
 0.744
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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