STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lip3Triacylglycerol lipase; Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold. (329 aa)    
Predicted Functional Partners:
lipA1
Triacylglycerol lipase precursor; Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold.
 
  
 
0.935
CVAR_2771
Putative secreted protein; Predicted esterase.
  
  
  0.911
CVAR_0180
Hypothetical protein; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase.
     
 0.903
cmtE
Trehalose corynomycolyl transferase; Predicted esterase.
  
 
  0.903
cmtC
Trehalose corynomycolyl transferase; Predicted esterase.
     
  0.900
CVAR_0542
Hypothetical protein; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases.
       0.832
fadD9
Long-chain acyl-CoA synthetases (AMP-forming).
   
 
 0.815
fadD8
Long-chain acyl-CoA synthetases (AMP-forming).
   
 
 0.815
fadD3
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
     
  0.800
CVAR_1528
Hypothetical protein; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase.
      
 0.774
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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