STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVAR_1073Putative oxidase; Choline dehydrogenase and related flavoproteins. (585 aa)    
Predicted Functional Partners:
CVAR_1072
Putative secreted protein; Guanyl-specific ribonuclease Sa.
       0.817
qcrC
Cytochrome c, mono- and diheme variants.
  
 
 0.708
CVAR_0432
Putative membrane protein.
    
 0.685
CVAR_1264
Hypothetical protein; Translation initiation factor 2 (IF-2; GTPase).
    
 0.685
CVAR_2912
Putative cell surface glycoprotein; Fibronectin type 3 domain-containing protein.
    
 0.685
CVAR_0873
Hypothetical protein.
   
 
 0.642
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family.
       0.629
CVAR_1075
Hypothetical protein.
  
    0.574
CVAR_1076
Hypothetical protein; Zn-dependent hydrolases, including glyoxylases.
     
 0.555
CVAR_1077
Uncharacterized protein conserved in bacteria.
       0.452
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.