STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVAR_11411-acyl-sn-glycerol-3-phosphate acyltransferase. (247 aa)    
Predicted Functional Partners:
cdsA
Phosphatidate cytidylyltransferase; CDP-diglyceride synthetase; Belongs to the CDS family.
    
 0.961
CVAR_0180
Hypothetical protein; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase.
 
  
 0.915
gpsA
Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.910
CVAR_0179
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 
 0.823
glk
Glucose kinase; Transcriptional regulator/sugar kinase.
       0.719
pimBP
Mannosyltransferase; Glycosyltransferase.
  
  
 0.643
fas
Fatty acid synthase; Enoyl reductase domain of yeast-type FAS1.
  
  
 0.634
CVAR_1138
Putative secreted protein; Cell wall-associated hydrolases (invasion- associated proteins).
       0.614
CVAR_1137
Putative secreted protein; Cell wall-associated hydrolases (invasion- associated proteins).
       0.497
CVAR_0098
Predicted membrane protein.
      
 0.487
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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