STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scrBSucrose-6-phosphate hydrolase; Beta-fructosidases (levanase/invertase). (461 aa)    
Predicted Functional Partners:
ptsG
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
 
  
 0.944
CVAR_0686
Hypothetical protein; Glycosidases.
  
 
 0.936
bglB
Beta-glucosidase-related glycosidases.
  
 
 0.904
ptsF
Phosphotransferase system, fructose-specific IIC component.
 
  
 0.786
CVAR_1862
Hypothetical protein; Predicted O-methyltransferase.
       0.590
CVAR_0957
Hypothetical protein.
  
   
 0.521
CVAR_1863
Uncharacterized membrane-associated protein.
       0.518
CVAR_1453
Hypothetical protein.
  
     0.502
sigE
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
  
    0.471
alsD
Alpha-acetolactate decarboxylase.
 
   
 0.470
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.