STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
entBEnterobactin isochorismatase; Isochorismate hydrolase. (175 aa)    
Predicted Functional Partners:
entE2
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
 
 
 0.983
nrpS3
Non-ribosomal peptide synthetase modules and related proteins.
 
  
 0.974
entE1
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
 
 
 0.971
entC1
Isochorismate synthase.
 
  
 0.959
fes
Enterochelin esterase and related enzymes.
 
  
 0.943
pks13
Polyketide synthase modules and related proteins.
  
  
 0.922
entA
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
  
 0.920
nrpS5
Non-ribosomal peptide synthetase modules and related proteins; Belongs to the ATP-dependent AMP-binding enzyme family.
 
  
 0.880
entC2
Isochorismate synthase.
 
  
 0.877
menF
Isochorismate synthase.
 
  
 0.869
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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