STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sugCABC-type sugar transport systems, permease components. (347 aa)    
Predicted Functional Partners:
sugA
ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 
 0.999
sugB
ABC-type sugar transport system, periplasmic component.
 
 0.999
sugD
ABC-type sugar transport system, permease component.
 
 0.999
ptsG
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
   
 
 0.835
CVAR_0686
Hypothetical protein; Glycosidases.
 
  
 0.656
ptsF
Phosphotransferase system, fructose-specific IIC component.
   
  
 0.631
nagE
Phosphotransferase system IIA components.
    
 
 0.609
potA
ABC transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
   
 0.401
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.