STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVAR_2519Predicted membrane protein. (134 aa)    
Predicted Functional Partners:
CVAR_2520
Uncharacterized protein conserved in bacteria.
       0.797
recR
Recombination protein; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
       0.787
CVAR_2522
Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.
       0.609
dnaX
DNA polymerase III, gamma/tau subunits.
       0.465
CVAR_0622
Resuscitation-promoting factor.
  
     0.450
CVAR_1807
Hypothetical protein; Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides.
  
     0.442
fas
Fatty acid synthase; Enoyl reductase domain of yeast-type FAS1.
       0.421
CVAR_0111
Non-ribosomal peptide synthetase modules and related proteins.
  
     0.408
accD2
Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
       0.407
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.