STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpxGlutathione peroxidase; Belongs to the glutathione peroxidase family. (170 aa)    
Predicted Functional Partners:
CVAR_2472
Hypothetical protein; Thiol-disulfide isomerase and thioredoxins.
   
 0.560
ccsX
Thiol-disulfide isomerase and thioredoxins.
   
 0.560
gadB
Glutamate decarboxylase and related PLP- dependent proteins; Belongs to the group II decarboxylase family.
  
  
 0.550
trxB
Thioredoxin reductase.
  
  
 0.535
CVAR_2981
Hypothetical protein; FOG: Glucan-binding domain (YG repeat).
       0.484
katA
Catalase; Belongs to the catalase family.
  
 
 0.481
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
 0.464
CVAR_0650
Glutaredoxin and related proteins.
  
 
 0.460
mshB
MshB deacetylase; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway.
     
 0.459
tpx
Thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily.
   
  
 0.457
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.