STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVAR_3074Hypothetical protein. (208 aa)    
Predicted Functional Partners:
CVAR_1880
Putative secreted protein.
 
    
0.737
CVAR_0787
Hypothetical protein.
  
     0.624
CVAR_1881
Hypothetical protein; Predicted nucleoside-diphosphate-sugar epimerases.
       0.613
CVAR_1453
Hypothetical protein.
  
     0.601
CVAR_2824
Hypothetical protein; Predicted nuclease (RecB family).
  
     0.565
CVAR_2868
Hypothetical protein; Predicted nuclease (RecB family).
  
     0.565
CVAR_1882
Putative phospholipase; Predicted esterase of the alpha-beta hydrolase superfamily.
       0.559
CVAR_2137
Hypothetical protein.
  
     0.558
fadE5
Acyl-CoA dehydrogenases.
       0.553
CVAR_0537
Putative secreted protein; Uncharacterized protein conserved in bacteria.
  
     0.549
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.