STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVAR_3076Transposase for insertion sequence element. (144 aa)    
Predicted Functional Partners:
CVAR_0320
Putative protein-tyrosine kinase; Capsular polysaccharide biosynthesis protein.
  
 
 0.661
CVAR_1858
Hypothetical protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 
 0.636
CVAR_2906
Putative membrane protein; ABC-type polysaccharide/polyol phosphate export systems, permease component.
  
  
 0.606
CVAR_2839
Transposase for insertion sequence element.
       0.553
CVAR_0322
Putative glycosyltransferase; Sugar transferases involved in lipopolysaccharide synthesis.
  
  
 0.552
CVAR_2838
Transposase for insertion sequence element.
       0.480
CVAR_1046
Hypothetical protein; Belongs to the UPF0337 (CsbD) family.
   
    0.418
CVAR_2401
Putative secreted protein.
   
    0.418
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.