STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cagECag pathogenicity island protein (cag23); Involved in DNA transfer. Required for induction of IL-8 in gastric epithelial cells. (983 aa)    
Predicted Functional Partners:
HP_0527
Cag pathogenicity island protein (cag7); Similar to GP:1800165 percent identity: 94.57; identified by sequence similarity; putative.
 
 
 0.963
HP_0525
virB11 homolog; Part of the Type IV secretion system. Belongs to the GSP E family.
 
  
 0.922
HP_0524
Cag pathogenicity island protein (cag5); Similar to GP:1800161 percent identity: 99.06; identified by sequence similarity; putative.
 
  
 0.888
HP_0040
Predicted coding region HP0040; Hypothetical protein; identified by GeneMark; putative.
 
 
  0.879
HP_0528
Cag pathogenicity island protein (cag8); Similar to GP:1800166 percent identity: 99.04; identified by sequence similarity; putative.
  
 
 0.875
HP_1421
Conjugative transfer regulon protein (trbB); Similar to GP:1800162 percent identity: 30.69; identified by sequence similarity; putative.
  
  
 0.832
HP_0546
Cag pathogenicity island protein (cag25); Similar to GP:1752698 percent identity: 95.65; identified by sequence similarity; putative.
     
 0.804
HP_0543
Cag pathogenicity island protein (cag22); Similar to GP:1752695 percent identity: 95.52; identified by sequence similarity; putative.
     
 0.795
HP_0545
Cag pathogenicity island protein (cag24); Similar to GP:1752697 percent identity: 98.54; identified by sequence similarity; putative.
     
 0.789
HP_1006
Conjugal transfer protein (traG); Similar to PID:1103907 SP:Q44346 percent identity: 27.33; identified by sequence similarity; putative.
  
  
 0.777
Your Current Organism:
Helicobacter pylori
NCBI taxonomy Id: 85962
Other names: H. pylori 26695, Helicobacter pylori (strain 26695), Helicobacter pylori 26695, Helicobacter pylori ATCC 700392, Helicobacter pylori KE26695, Helicobacter pylori str. 26695, Helicobacter pylori strain 26695
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.