STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALTA1260S acidic ribosomal protein P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (113 aa)    
Predicted Functional Partners:
CLCR_03735
60S ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
 
 
 0.999
rpl3
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 0.999
CLCR_04232
60S ribosomal protein L5.
   
 0.999
crpp0
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 0.999
rpl8
60S ribosomal protein L8.
   
 0.999
CLCR_10941
60S ribosomal protein L30.
   
 0.999
rpl21b
60S ribosomal protein L21-B.
   
 0.999
CLCR_00214
60S acidic ribosomal protein P2; Belongs to the eukaryotic ribosomal protein P1/P2 family.
  
0.999
RPL19B
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.999
RPL26A
60S ribosomal protein L26-1.
   
 0.998
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.