STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phyA3-phytase A; Belongs to the histidine acid phosphatase family. (458 aa)    
Predicted Functional Partners:
CLCR_04279
Thiamine pyrophosphokinase; Belongs to the thiamine pyrophosphokinase family.
    
 0.873
CLCR_07471
Putative HAD superfamily hydrolase.
     
 0.642
CLCR_08135
Putative hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 2.
     
 0.626
thi4
Putative thiamine biosynthetic bifunctional enzyme.
     
 0.621
DCR2
Phosphatase DCR2.
     
 0.582
phoA
Acid phosphatase.
    
  0.567
idh2
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
 
      0.520
CLCR_07937
Ankyrin repeat protein nuc-2.
   
 
 0.518
ala1
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.
      
 0.499
CLCR_06084
Nudix hydrolase domain-containing protein.
    
 0.464
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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