STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_10558Uncharacterized protein. (320 aa)    
Predicted Functional Partners:
lacA
Beta-galactosidase.
   
 0.733
CLCR_04285
Phosphatidylethanolamine-binding protein.
   
 
 0.678
CLCR_01591
Uncharacterized protein.
    
 0.553
CLCR_04562
C3HC4 type (RING finger) zinc finger containing protein.
    
 
 0.547
pep2
Vacuolar protease A; Belongs to the peptidase A1 family.
   
 0.538
CTSD
Putative aspartic-type endopeptidase CTSD; Belongs to the peptidase A1 family.
   
 0.538
CLCR_06632
Putative ubiquitin-protein ligase Sel1/Ubx2.
    
 
 0.524
CLCR_04372
Uncharacterized protein.
   
 
 0.504
yos9
Protein OS-9 like protein.
   
 
 0.504
cdc48
Cell division control protein 48; Belongs to the AAA ATPase family.
    
 0.490
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.