STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPD24313.1Addiction module toxin RelE; Derived by automated computational analysis using gene prediction method: Protein Homology. (96 aa)    
Predicted Functional Partners:
KPD24312.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.952
KPD24413.1
Damage-inducible protein J; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.902
KPD23110.1
Cro/Cl family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.703
KPD24309.1
Addiction module protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.700
KPD24310.1
Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
  0.659
KPD24803.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.646
KPD24311.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.550
KPD21398.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.532
KPD24113.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.524
KPD24954.1
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
  0.479
Your Current Organism:
Idiomarina zobellii
NCBI taxonomy Id: 86103
Other names: ATCC BAA-313, I. zobellii, Idiomarina zobellii Ivanova et al. 2000, KMM 231, marine bacterium KM231
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