STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARI_12400Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms. (212 aa)    
Predicted Functional Partners:
AARI_12390
Iron/manganese/zinc ABC transporter, inner membrane subunit; TCDB: ATP-binding cassette (ABC) superfamily, Manganese/Zinc/Iron Chelate Uptake Transporter (MZT) Family (TC 3.A.1.15.z). ABCISSE: ABC transporter, permease (IM), MET-family. This family is comprised of systems involved in the uptake of various metallic cations such as iron, manganese and zinc.
       0.561
AARI_12380
Iron/manganese/zinc ABC transporter, ATP-binding subunit; TCDB: ATP-binding cassette (ABC) superfamily, Manganese/Zinc/Iron Chelate Uptake Transporter (MZT) Family (TC 3.A.1.15.z). ABCISSE: ABC transporter, ATP- binding protein (ABC), MET-family. This family is comprised of systems involved in the uptake of various metallic cations such as iron, manganese and zinc.
       0.554
AARI_01550
HNH endonuclease domain-containing protein; Identified by match to SM00507.
  
     0.420
AARI_07100
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.415
hemD-2
uroporphyrinogen-III synthase catalyses the following reaction: hydroxymethylbilane <=> uroporphyrinogen III + H(2)O. Possible fusion with a response regulator domain protein.
  
     0.410
Your Current Organism:
Glutamicibacter arilaitensis
NCBI taxonomy Id: 861360
Other names: Arthrobacter arilaitensis CIP 108037, Arthrobacter arilaitensis Re117, G. arilaitensis Re117, Glutamicibacter arilaitensis Re117
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