STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARI_34130Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms. (477 aa)    
Predicted Functional Partners:
AARI_34120
Conserved hypothetical membrane protein; 6 transmembrane helices predicted by TMHMM2.0.
       0.773
AARI_34140
Conserved hypothetical membrane protein; 8 transmembrane helices predicted by TMHMM2.0.
       0.773
crtB
Phytoene synthase; Identified by similarity to protein SP:Q93QX6 (Corynebacterium glutamicum), match to protein family PF00494. Phytoene synthase catalyzes the conversion of two molecules of geranylgeranyl diphosphate (GGPP) into phytoene. It is the second step in the biosynthesis of carotenoids from isopentenyl diphosphate. It is found in all organisms that synthesize carotenoids: plants and photosynthetic bacteria as well as some non- photosynthetic bacteria and fungi.
  
  
 0.629
AARI_34100
Putative drug ABC transporter, inner membrane subunit; TC 3.A.1.y.z. ABCISSE: ABC transporter, permease (IM), DRI-family, DRB-subfamily (drug resistance, putative). Possible function in drug efflux.
       0.486
AARI_34110
Putative drug resistance ATP-binding protein; TC 3.A.1.y.z. ABCISSE: ABC transporter, ATP-binding protein (ABC), DRI-family, DRB-subfamily (drug resistance, putative). Possible function in drug efflux.
       0.486
AARI_34150
Putative N-acylneuraminate cytidylyltransferase; Match to protein family PF02348. EC 2.7.7.43 catalyzes the reaction of CTP and NeuAc to form CMP-NeuAc, which is the nucleotide sugar donor used by sialyltransferases. The outer membrane lipooligosaccharides of some microorganisms contain terminal sialic acid attached to N-acetyllactosamine.
       0.463
AARI_34160
Putative N-acylneuraminate-9-phosphate synthase; Match to protein family PF03102. EC 2.5.1.57 catalyses the direct formation of Neu5Ac (the most common sialic acid) by condensation of phosphoenolpyruvate (PEP) and N-acetylmannosamine (ManNAc).
       0.449
AARI_34080
Response regulators are key elements in two-component signal transduction systems, which enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions.
       0.426
AARI_34090
Protein-histidine kinases are key elements in two-component signal transduction systems, which enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions. 5 transmembrane helices predicted by TMHMM2.0.
       0.426
Your Current Organism:
Glutamicibacter arilaitensis
NCBI taxonomy Id: 861360
Other names: Arthrobacter arilaitensis CIP 108037, Arthrobacter arilaitensis Re117, G. arilaitensis Re117, Glutamicibacter arilaitensis Re117
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