STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTT_01727Methionine aminopeptidase 2-2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val); Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily. (459 aa)    
Predicted Functional Partners:
PTT_13927
Uncharacterized protein.
  
 
 0.822
PTT_09448
Ribosomal_L18_c domain-containing protein.
  
 
 0.815
PTT_15978
KOW domain-containing protein.
  
   0.804
PTT_18182
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.794
PTT_00488
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
 0.786
PTT_16423
Ribosomal_L23eN domain-containing protein.
  
 
 0.762
PTT_16796
Glutamine amidotransferase type-1 domain-containing protein.
     
 0.723
PTT_06292
Uncharacterized protein.
  
 
 0.717
PTT_10833
Uncharacterized protein.
  
 
 0.717
PTT_09136
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
  
   0.706
Your Current Organism:
Pyrenophora teres
NCBI taxonomy Id: 861557
Other names: P. teres f. teres 0-1, Pyrenophora teres f. teres 0-1
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