STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEN13613.1KEGG: sma:SAV_7182 xylose isomerase; TIGRFAM: xylose isomerase; PFAM: Xylose isomerase domain protein TIM barrel. (389 aa)    
Predicted Functional Partners:
xylB
Xylulokinase; KEGG: sgr:SGR_1071 putative xylulose kinase; TIGRFAM: xylulokinase; PFAM: Carbohydrate kinase, FGGY-like.
 
  
 0.926
AEN09822.1
PFAM: Carbohydrate kinase, FGGY-like; KEGG: sgr:SGR_5070 putative sugar kinase; Belongs to the FGGY kinase family.
 
  
 0.826
AEN13056.1
KEGG: sgr:SGR_1498 putative ABC transporter solute-binding protein.
 
  
 0.453
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
     
 0.428
AEN14216.1
PFAM: Carbohydrate kinase, FGGY-like; KEGG: sen:SACE_4103 putative rhamnose kinase.
 
  
 0.422
AEN09804.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sco:SCO2404 sugar-binding receptor.
 
  
 0.409
Your Current Organism:
Streptomyces sp. SirexAAE
NCBI taxonomy Id: 862751
Other names: S. sp. SirexAA-E, Streptomyces sp. ACTE, Streptomyces sp. SA3_actE, Streptomyces sp. SirexAA-E
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.