STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
guaDGuanine deaminase. (440 aa)    
Predicted Functional Partners:
xdhB
Putative xanthine dehydrogenase large subunit.
 
 
 0.981
xdhA
Putative xanthine dehydrogenase.
 
  
  0.978
hpt
Putative phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
 
  
 0.944
punA
Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
  
 
 0.918
BMS_2855
Putative dehydrogenase accessory protein.
 
  
 0.766
BMS_1939
Putative carbamoyl phosphate synthase large subunit; Belongs to the CarB family.
  
    0.662
BMS_1460
Putative membrane protein.
       0.575
ade
Adenine deaminase (Adenase) (Adenine aminase); Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.
 
   
 0.477
BMS_3078
Putative exported protein.
  
    0.473
hutH
Histidine ammonia-lyase.
  
  
 0.469
Your Current Organism:
Halobacteriovorax marinus
NCBI taxonomy Id: 862908
Other names: Bacteriovorax marinus SJ, Bdellovibrio sp. SJ, H. marinus SJ, Halobacteriovorax marinus SJ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.