STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMS_1556Putative exported protein. (1811 aa)    
Predicted Functional Partners:
BMS_2586
Putative exported protein.
 
 
   0.768
BMS_1425
Putative exported protein.
  
    0.761
BMS_1855
Conserved hypothetical protein.
  
     0.752
BMS_3427
Putative exported protein.
 
     0.748
BMS_0409
Putative exported protein.
  
     0.729
BMS_2960
Putative two-component system, sensor kinase.
  
     0.723
BMS_1353
Putative membrane protein.
 
     0.715
BMS_0329
Putative membrane protein.
 
     0.655
BMS_1345
Putative exported protein.
  
     0.653
wapA
Putative exported protein.
 
  
 0.650
Your Current Organism:
Halobacteriovorax marinus
NCBI taxonomy Id: 862908
Other names: Bacteriovorax marinus SJ, Bdellovibrio sp. SJ, H. marinus SJ, Halobacteriovorax marinus SJ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.