STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dacAPenicillin-binding protein 3; Belongs to the peptidase S11 family. (413 aa)    
Predicted Functional Partners:
pbp2X
Penicillin-binding protein 2/putative cell division protein FtsI.
  
 
 0.931
pbp2b
Putative penicillin binding protein 2B.
  
 
 0.926
pbp1a
Penicillin binding protein 1A.
  
 
 0.922
SCI_0144
Penicillin-binding protein.
  
 
 0.913
SCI_1741
Putative penicillin binding protein IIB.
  
 
 0.909
SCI_0283
Surface antigen.
    
 0.906
SCI_1379
Serine-type D-Ala-D-Ala carboxypeptidase.
    
 0.906
cshB
ATP-dependent RNA helicase; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures.
       0.534
SCI_1219
Hypothetical protein.
  
  
 0.495
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
  
 0.437
Your Current Organism:
Streptococcus constellatus
NCBI taxonomy Id: 862969
Other names: S. constellatus subsp. pharyngis C1050, Streptococcus constellatus subsp. pharyngis C1050, Streptococcus constellatus subsp. pharyngis str. C1050, Streptococcus constellatus subsp. pharyngis strain C1050
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