STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKQ68231.1IMG reference gene:2510096424; PFAM: Legionella pneumophila major outer membrane protein precursor. (557 aa)    
Predicted Functional Partners:
EKQ68232.1
IMG reference gene:2510096425; PFAM: NAD dependent epimerase/dehydratase family.
       0.526
EKQ68233.1
Hypothetical protein; IMG reference gene:2510096426; PFAM: F420-0:Gamma-glutamyl ligase.
       0.525
Your Current Organism:
Oscillatoriales cyanobacterium JSC12
NCBI taxonomy Id: 864702
Other names: O. cyanobacterium JSC-12, Oscillatoriales cyanobacterium JSC-12
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