STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ04235.1KEGG: zpr:ZPR_2601 hypothetical protein; SPTR: Putative uncharacterized protein. (135 aa)    
Predicted Functional Partners:
EHQ04293.1
KEGG: zpr:ZPR_2350 hypothetical protein; SPTR: Secreted protein.
  
     0.739
EHQ04109.1
KEGG: gfo:GFO_1067 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.738
EHQ01121.1
dTDP-4-dehydrorhamnose reductase; PFAM: RmlD substrate binding domain; COGs: COG1091 dTDP-4-dehydrorhamnose reductase; InterPro IPR001509; KEGG: gfo:GFO_1497 dTDP-4-dehydrorhamnose reductase-like protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: DTDP-4-dehydrorhamnose reductase-like protein.
  
     0.735
EHQ04298.1
KEGG: gfo:GFO_1792 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.722
EHQ01976.1
KEGG: zpr:ZPR_0954 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.720
EHQ03977.1
Rhodanese-like protein; PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001763; KEGG: fte:Fluta_3008 Rhodanese-like protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Rhodanese-like protein.
   
 
  0.718
EHQ04198.1
KEGG: cat:CA2559_09993 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.717
EHQ01108.1
KEGG: cat:CA2559_10443 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.712
EHQ04285.1
KEGG: gfo:GFO_1780 membrane protein; SPTR: Membrane protein.
  
     0.699
EHQ04148.1
KEGG: gfo:GFO_1451 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.688
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.