STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ04298.1KEGG: gfo:GFO_1792 hypothetical protein; SPTR: Putative uncharacterized protein. (320 aa)    
Predicted Functional Partners:
EHQ04109.1
KEGG: gfo:GFO_1067 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.774
EHQ03957.1
KEGG: cat:CA2559_08806 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.772
EHQ02508.1
Esterase; PFAM: Putative esterase; COGs: COG2819 hydrolase of the alpha/beta superfamily; InterPro IPR000801; KEGG: gfo:GFO_3541 hypothetical protein; PFAM: Putative esterase; SPTR: Putative uncharacterized protein.
  
     0.769
EHQ03079.1
KEGG: gfo:GFO_0107 membrane protein; SPTR: Membrane protein.
  
     0.769
EHQ03062.1
KEGG: zpr:ZPR_4541 hypothetical protein; SPTR: Secreted protein.
  
     0.768
EHQ03059.1
KEGG: gfo:GFO_0089 membrane protein; SPTR: Membrane protein.
  
     0.760
EHQ01976.1
KEGG: zpr:ZPR_0954 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.758
EHQ02805.1
KEGG: gfo:GFO_3412 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.757
EHQ01910.1
KEGG: zpr:ZPR_3673 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.754
EHQ03243.1
KEGG: gfo:GFO_0074 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.754
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.