STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ01452.1PFAM: Bacterial regulatory proteins, luxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792; KEGG: gfo:GFO_2064 LuxR family transcriptional regulator protein; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; SPTR: LuxR family transcriptional regulator protein. (378 aa)    
Predicted Functional Partners:
EHQ02699.1
Multi-sensor signal transduction histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; CHASE3 domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR001610:IPR003661:IPR003594:IPR 007891:IPR013655:IPR013656; KEGG: fba:FIC_01552 two-component system sensor histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; CHASE3; PAS fold-3; PAS fold-4; SMART: ATP-binding region, ATPa [...]
  
 0.967
EHQ02924.1
PFAM: CheB methylesterase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; CheR methyltransferase, SAM binding domain; His Kinase A (phosphoacceptor) domain; CheR methyltransferase, all-alpha domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG1352 Methylase of chemotaxis methyl-accepting protein; InterProIPR000014:IPR000780:IPR001610:IPR003661:IPR 003594:IPR000673:IPR013767:IPR013656:IPR013655; KEGG: gfo:GFO_1684 two-component system sensor histidine kinase/methyl-esterase/transferase hybrid; PFAM: ATP-binding region, ATPase-like; PAS fold-3; Signal transduction response re [...]
   
 0.878
EHQ03194.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG0642 Signal transduction histidine kinase; InterProIPR003661:IPR003594:IPR001789:IPR000005:IPR 018060; KEGG: cly:Celly_2465 AraC family two component transcriptional regulator; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal tra [...]
  
 0.877
EHQ03118.1
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG4585 Signal transduction histidine kinase; InterPro IPR019734:IPR003594; KEGG: gfo:GFO_2620 two-component system sensor histidine kinase; PFAM: ATP-binding region, ATPase-like; SPTR: Two-component system sensor histidine kinase.
 
 0.866
EHQ04039.1
Putative signal transduction histidine kinase; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG4585 Signal transduction histidine kinase; InterProIPR013767:IPR013656:IPR013655:IPR011712:IPR 003594:IPR000014:IPR001610; KEGG: sat:SYN_01954 signal transduction histidine kinase; PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; PAS fold-4; PAS fold; PAS fold-3; ATP-binding region, ATPase-like; SPTR: Signal transduction histidine kinase; TIGRFAM: PAS.
 
 0.856
EHQ03508.1
Histidine kinase; PFAM: Y_Y_Y domain; Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Two component regulator propeller; COGs: COG0642 Signal transduction histidine kinase; InterProIPR011110:IPR011123:IPR003594:IPR001789:IPR 018060; KEGG: gfo:GFO_2999 two-component system sensor histidine kinase/response regulator hybrid; PFAM: ATP-binding region, ATPase-like; Two component regulator three Y; Two component regulator propeller; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction [...]
  
 0.851
EHQ01325.1
Putative signal transduction histidine kinase; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG4585 Signal transduction histidine kinase; InterPro IPR011712:IPR003594; KEGG: gfo:GFO_2118 two-component system sensor histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; SPTR: Two-component system sensor histidine kinase.
 
 0.849
EHQ02843.1
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR000014:IPR001610:IPR003594:IPR013655; KEGG: gfo:GFO_3178 two-component system sensor histidine kinase; PFAM: ATP-binding region, ATPase-like; PAS fold-3; SMART: ATP-binding region, ATPase-like; PAC motif; SPTR: Two-component system sensor histidine kinase; TIGRFAM: PAS.
 
 
 0.844
EHQ01450.1
KEGG: gfo:GFO_2063 membrane or secreted protein; SPTR: Membrane or secreted protein.
 
     0.818
EHQ01451.1
Hypothetical protein; InterPro IPR003367; KEGG: gfo:GFO_2062 membrane or secreted protein; SPTR: Membrane or secreted protein.
 
     0.806
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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