STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ01593.1ATPase; KEGG: zpr:ZPR_1784 ATPase; SPTR: ATPase. (220 aa)    
Predicted Functional Partners:
EHQ01594.1
KEGG: gfo:GFO_1373 hypothetical protein; SPTR: Putative uncharacterized protein.
 
  
 0.954
EHQ01595.1
KEGG: gfo:GFO_1374 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.948
EHQ01596.1
Tetracycline regulation of excision, RteC; PFAM: RteC protein; InterPro IPR018534; KEGG: zpr:ZPR_4099 regulatory protein RteC; PFAM: Tetracycline regulation of excision, RteC; SPTR: Regulatory protein RteC.
 
     0.858
EHQ03501.1
Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
 
 0.839
EHQ02120.1
KEGG: gfo:GFO_1373 hypothetical protein; SPTR: Putative uncharacterized protein.
 
  
 0.805
EHQ02121.1
KEGG: zpr:ZPR_4100 DNA-binding protein; SPTR: Putative DNA-binding protein.
 
     0.783
EHQ02122.1
Tetracycline regulation of excision, RteC; PFAM: RteC protein; InterPro IPR018534; KEGG: gfo:GFO_1375 regulatory protein RteC; PFAM: Tetracycline regulation of excision, RteC; SPTR: Regulatory protein RteC.
  
     0.762
EHQ02091.1
Hypothetical protein; PFAM: Neuroendocrine-specific golgi protein P55 (NESP55); KEGG: zpr:ZPR_4131 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.731
EHQ02093.1
Mobilization protein C; PFAM: Type IV secretion-system coupling protein DNA-binding domain; COGs: COG3505 Type IV secretory pathway VirD4 protein; KEGG: zpr:ZPR_4129 mobilisation protein C; SPTR: Mobilisation protein C.
 
     0.731
EHQ01571.1
Mobilization protein C; PFAM: Type IV secretion-system coupling protein DNA-binding domain; COGs: COG3505 Type IV secretory pathway VirD4 protein; KEGG: zpr:ZPR_4129 mobilisation protein C; SPTR: Mobilisation protein C.
 
     0.726
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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