STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ03009.1KEGG: zpr:ZPR_4604 hypothetical protein; SPTR: Membrane protein. (269 aa)    
Predicted Functional Partners:
EHQ04038.1
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor; PFAM: CheB methylesterase; CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain; PAS fold; COGs: COG1352 Methylase of chemotaxis methyl-accepting protein; InterPro IPR000673:IPR000780:IPR013656:IPR000014; KEGG: dba:Dbac_2162 MCP methyltransferase/methylesterase CheR/CheB; PFAM: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase; MCP methyltransferase, CheR-type; PAS fold-4; SMART: MCP methyltransferase, CheR-type; SPTR: MCP methyltransferase/methylester [...]
    
 0.815
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
 
  0.751
EHQ03008.1
Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase; COGs: COG1407 ICC-like phosphoesterase; InterPro IPR004843; KEGG: gfo:GFO_3152 phosphoesterase domain-containing protein; PFAM: Metallophosphoesterase; SPTR: Metallophosphoesterase.
       0.742
EHQ03007.1
ATP dependent helicase, Lhr family; PFAM: Helicase conserved C-terminal domain; DEAD/H associated; DEAD/DEAH box helicase; COGs: COG1201 Lhr-like helicase; InterPro IPR014001:IPR001650:IPR011545:IPR013701; KEGG: gfo:GFO_3528 DEAD box helicase family protein; PFAM: DEAD/H associated; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: DEAD box helicase family protein.
       0.701
EHQ01272.1
OmpA/MotB domain protein; PFAM: WD40-like Beta Propeller Repeat; OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR011659:IPR006665; KEGG: gfo:GFO_1838 OmpA/MotB family outer membrane protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; WD40-like Beta Propeller; SPTR: OmpA/MotB family outer membrane protein.
  
 
 0.682
EHQ02259.1
OmpA/MotB domain protein; PFAM: WD40-like Beta Propeller Repeat; OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR011659:IPR006665; KEGG: gfo:GFO_2865 OmpA/MotB family outer membrane protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; WD40-like Beta Propeller; SPTR: OmpA/MotB family outer membrane protein.
  
 
 0.682
EHQ01882.1
Amidohydrolase; PFAM: WD40-like Beta Propeller Repeat; Amidohydrolase family; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR011659:IPR002469:IPR006680; KEGG: gfo:GFO_0308 WD-40-like repeat-containing amidohydrolase; PFAM: Amidohydrolase 1; Peptidase S9B, dipeptidylpeptidase IV N-terminal; WD40-like Beta Propeller; SPTR: WD40-like repeat containing amidohydrolase family protein.
  
 
 0.585
EHQ03576.1
PFAM: PEGA domain; InterPro IPR013229:IPR003961; KEGG: fjo:Fjoh_2352 fibronectin, type III domain-containing protein; PFAM: PEGA; Fibronectin, type III; SPTR: Peptidase family S9-like protein.
  
 
 0.585
EHQ02924.1
PFAM: CheB methylesterase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; CheR methyltransferase, SAM binding domain; His Kinase A (phosphoacceptor) domain; CheR methyltransferase, all-alpha domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG1352 Methylase of chemotaxis methyl-accepting protein; InterProIPR000014:IPR000780:IPR001610:IPR003661:IPR 003594:IPR000673:IPR013767:IPR013656:IPR013655; KEGG: gfo:GFO_1684 two-component system sensor histidine kinase/methyl-esterase/transferase hybrid; PFAM: ATP-binding region, ATPase-like; PAS fold-3; Signal transduction response re [...]
 
  
  0.578
EHQ02289.1
PFAM: Biopolymer transport protein ExbD/TolR; COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: zpr:ZPR_3933 ExbD/TolR family biopolymer transport protein; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: ExbD/TolR family biopolymer transport protein.
  
   0.559
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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